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Creators/Authors contains: "Saloni, Julia"

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  1. The rapid spread of SARS-CoV-2 required immediate actions to control the transmission of the virus and minimize its impact on humanity. An extensive mutation rate of this viral genome contributes to the virus’ ability to quickly adapt to environmental changes, impacts transmissibility and antigenicity, and may facilitate immune escape. Therefore, it is of great interest for researchers working in vaccine development and drug design to consider the impact of mutations on virus-drug interactions. Here, we propose a multitarget drug discovery pipeline for identifying potential drug candidates which can efficiently inhibit the Receptor Binding Domain (RBD) of spike glycoproteins from different variants of SARS-CoV-2. Eight homology models of RBDs for selected variants were created and validated using reference crystal structures. We then investigated interactions between host receptor ACE2 and RBDs from nine variants of SARS-CoV-2. It led us to conclude that efficient multi-variant targeting drugs should be capable of blocking residues Q(R)493 and N487 in RBDs. Using methods of molecular docking, molecular mechanics, and molecular dynamics, we identified three lead compounds (hesperidin, narirutin, and neohesperidin) suitable for multitarget SARS-CoV-2 inhibition. These compounds are flavanone glycosides found in citrus fruits – an active ingredient of Traditional Chinese Medicines. The developed pipeline can be further used to (1) model mutants for which crystal structures are not yet available and (2) scan a more extensive library of compounds against other mutated viral proteins. 
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  2. Non-noble metal based electrocatalysts for the hydrogen evolution reaction (HER) hold great potential for commercial applications. However, effective design strategies are greatly needed to manipulate the catalyst structures to achieve high activity and stability comparable to those of noble-metal based electrocatalysts. Herein, we present a facile route to synthesize layered Co 9 S 8 intercalated with Co cations (Co 2+ -Co 9 S 8 ) (with interlayer distance up to 1.08 nm) via a one-step solvothermal method. Benefiting from a large interlayer distance and efficient electron transfer between layers, the Co 2+ -Co 9 S 8 hybrid shows outstanding electrocatalytic hydrogen evolution performance in an acid electrolyte. The electrocatalytic performance is even better than that of 20% Pt/C at the <−0.54 V region with an overpotential of 86 mV at a current density of 10 mA cm −2 in 0.5 mol L −1 H 2 SO 4 . More importantly, the system can maintain excellent stability for more than 12 h without obvious decay. This study not only presents a novel and efficient approach to synthesize cobalt sulfide intercalated with Co cations for stable electrocatalytic HER but also provides an avenue for the design of intercalated materials used in other energy applications. 
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  3. Abstract The design of bright, high quantum yield (QY) materials in the near‐infrared (NIR) spectral region in water remains a significant challenge. A series of cyanine and squaraine dyes varying water solubilizing groups and heterocycles are studied to probe the interactions of these groups with albumin in water. Unprecedented, ′ultra‐bright′ emission in water is observed for a sulfonate indolizine squaraine dye (61.1 % QY) and a sulfonate indolizine cyanine dye (46.7 % QY) at NIR wavelengths of >700 nm and >800 nm, respectively. The dyes presented herein have a lower limit of detection than the most sensitive dyes known in the NIR region for albumin detection by at least an order of magnitude, which enables more sensitive diagnostic testing. Additionally, biotinylated human serum albumin complexed with the dyes reported herein was observed to function as an immunohistochemical reagent enabling high resolution imaging of cellular α‐tubulin at low dye concentrations. 
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